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  1. Module 1 Databases

   1. Definition of Databases.srt

   2. Database Design.srt

   3. Knowledge Discovery.srt

   4. Biological Databases.srt

   5. Take Home Key Points.srt

   6. Practical -1 NCBI Nucleotide Database.srt

   7. Practical-2 Protein Databank (PDB).srt

   9. Assignment 1.html

  2. Module 2 Sequence Alignment

   1. What is Sequence Alignment.srt

   11. Dynamic Programming Method How Does It Work.mp4

   12. How to Transform Scoring Matrix to Alignment.mp4

   13. Dynamic Programming; Some Important Terms to Understand.mp4

   14. Comparison Between DotMatrix and Dynamic Programming.mp4

   15. Practical-4 Global Pairwise Sequence Alignment Using DNA Sequences.mp4

   16. Practical-5 Pairwise Sequence Alignment Using Protein.mp4

   17. Practical-6 Local Pairwise Sequence.mp4

   18. Assignment 3.html

   19. Introduction to Database Searching; BLAST.srt

   2. Some Important Terms.srt

   20. Type of Algorithms.srt

   21. How Does Word Algorithm Work (Part-1).srt

   22. How Does Word Algorithm Work (Part-2).srt

   23. A Important Term For Word Algorithm.srt

   24. Important Statistical Values to Evaluate the BLAST Results.srt

   25. Different Type of BLAST Associated with NCBI Databases.srt

   26. Practical -7 How to Use BLAST Program.srt

   28. Optional How to Use PSI-BLAST.mp4

   29. Multiple Sequence Alignment; An Introduction.mp4

   3. Types of Sequence Alignment.mp4

   30. Algorithms for Multiple Sequence Alignment.mp4

   31. Progressive Sequence Alignment Algorithm.mp4

   32. Tools for Multiple Sequence Alignment.mp4

   33. Practical -8 How to Use CLUSTAL-W.mp4

   34. Practical -9 How to Use T-COFFEE.mp4

   35. Assignment 5.html

   4. What is Algorithms.mp4

   5. Dot Matrix Algorithm; How Does It Work.mp4

   6. Dot Matrix Algorithm; How to Interpret The Results.mp4

   7. Dot Matrix Algorithm; Identification of Repeat Sequences.mp4

   8. Dot Matrix Algorithm; Advantages Vs Disadvantages.mp4

   9. Practical-3 DotMatcher for Qualitative Comparison of Sequence.mp4

  3. Section 3 Genomic Bioinformatics

   1. Introduction of Module 3.srt

   10. Introduction of Markov Model (Part-2).srt

   11. Machine Learning and Gene Prediction.srt

   12. Practical-10 Prediction of Prokaryotic Gene.srt

   13. Practical-10.1 Prediction of Prokaryotic Regulatory Elements.srt

   14. Practical-11 Prediction of Eukaryotic Gene.srt

   16. Assignment 7.html

   2. What is DNA.mp4

   3. Where Is Our DNA is Located.mp4

   4. What Is Role of DNA.mp4

   5. What Does Gene Have.mp4

   6. Algorithms for Gene Prediction-1.mp4

   7. Algorithms for Gene Prediction-2.mp4

   8. GC-Bias and Test Code; An Ab-initio Type of Algorithm.mp4

   9. Introduction of Markov Model (Part-1).mp4

  4. Module 4 Structural Bioinformatics

   1. Introduction of Module 4.srt

   10. Practical 13 Visualization of Protein Structure in Pymol (Part-1).srt

   11. Why Protein Structure Prediction is So Important.srt

   12. Protein Secondary Structure Prediction Algorithms (Part-1).srt

   13. Protein Secondary Structure Prediction Algorithms (Part-2).srt

   14. Practical-15 Prediction of Globular Protein Secondary Structure.srt

   16. Algorithm for Secondary Structure Prediction of Transmembrane Proteins.mp4

   17. Practical-16 Prediction of Transmembrane Helix Secondary Structure.mp4

   18. Assignment 9.html

   19. 3D Structure Prediction Algorithms.srt

   2. What is Protein (Part-1).srt

   20. Homology Based Algorithm (Part-1).srt

   21. Homology Based Algorithm (Part-2).srt

   22. Homology Based Algorithm (Part-3).srt

   23. Homology Based Algorithm (Part-4).srt

   24. Model Validation & Draw back of Homology Based Algorithm.srt

   25. Practical-17 Prediction of 3D structure Using Homology Modeling (Mdeller).srt

   25.2 pdb_95.pir

   25.4 script1.py

   25.6 script3.py

   25.8 script5.py

   27. Threading Algorithm for 3D Structure Prediction.mp4

   28. Practical-18 Prediction of 3D structure Using Threading Technique (I-TASSER).mp4

   29. Assignment 11.html

   3. What is Protein (Part-2).srt

   30. (Optional) Practical-18.1 Use of InterPro.srt

   31. (Optional) Practical-20 How to Perform Docking Easily Using Vina.srt

   32. (Optional) Practical-21 How to Analyze the Docking Data.srt

   33. (Optional) Practical 3 ZINC Database for Drug Searching.srt

   35. (Very Important) Practical Learn How to Use Alpha-Fold.mp4

   36. Update Another GOR-IV Server for Secondary Structure Predictions.mp4

   4. Some Important Points.mp4

   5. Role of Amino Acids in 3D Structure.mp4

   6. Peptide Bond; A link between Amino Acids.mp4

   7. Secondary Structures of Proteins.mp4

   8. Double Bond like Character in Peptide Bond & Ramachandran Plot.mp4

   9. Forces Stabilizing The Protein Structure.mp4

  5. Module 5 Evolutionary Bioinformatics

   1. What is Evolution and Phylogenetics.srt

   10. Practical -19 Building Phylogenetic Tree.srt

   12. Quiz 5.html

   2. Some Important Terms To Understand Phylogenetic Tree.srt

   3. Different Type of Phylogenetic Trees.srt

   4. Steps To Construct Phylogenetic Tree.srt

   5. Selection of Molecular Marker for Tree Construction.srt

   6. Alignment for Tree Construction.srt

   7. Evolutionary Model Selection.srt

   8. Methods To Construct Tree.srt

   9. Validation of Tree By Bootstrapping.srt

  6. Module 6 (Optional)

   1. Practical-22 How to install Linux in Windows for Bioinformatics Analysis.srt

   2. Practical-23 How to Install Gromacs in Windows.srt